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Cluster: Rep_729_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_729_c_22 Rep_729_c_22_28 31589 33649 + GH50 | GH50
pfam Rep_729_c_22 Rep_729_c_22_29 34061 34765 + N_methyl
NULL(UNKNOWN) Rep_729_c_22 Rep_729_c_22_30 35001 35687 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_729_c_22 Rep_729_c_22_31 36024 37016 + 3.A.1.23.7
pfam Rep_729_c_22 Rep_729_c_22_32 37013 37777 + CbiQ
TC Rep_729_c_22 Rep_729_c_22_33 37774 38481 + 3.A.1.23.8
peptidase Rep_729_c_22 Rep_729_c_22_34 38552 39472 + M15.021
CAZyme Rep_729_c_22 Rep_729_c_22_35 39645 40796 + GH179
Gene ID: Rep_729_c_22_28
Type: CAZyme
Location: 31589 - 33649 (+)
Gene ID: Rep_729_c_22_29
Type: pfam
Location: 34061 - 34765 (+)
Gene ID: Rep_729_c_22_30
Type:
Location: 35001 - 35687 (+)
Gene ID: Rep_729_c_22_31
Type: TC
Location: 36024 - 37016 (+)
Gene ID: Rep_729_c_22_32
Type: pfam
Location: 37013 - 37777 (+)
Gene ID: Rep_729_c_22_33
Type: TC
Location: 37774 - 38481 (+)
Gene ID: Rep_729_c_22_34
Type: peptidase
Location: 38552 - 39472 (+)
Gene ID: Rep_729_c_22_35
Type: CAZyme
Location: 39645 - 40796 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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