Cluster: Rep_728_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_728
- CGC Family ID: CGCFAM_11306
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_728_c_199 | Rep_728_c_199_6 | 7194 | 8948 | + | GH35 |
| TF | Rep_728_c_199 | Rep_728_c_199_7 | 8923 | 9804 | - | HTH_AraC |
| CAZyme | Rep_728_c_199 | Rep_728_c_199_8 | 9932 | 11566 | + | GH78 |
| pfam | Rep_728_c_199 | Rep_728_c_199_9 | 11575 | 12591 | - | GTP1_OBG | MMR_HSR1 | FeoB_N |
| pfam | Rep_728_c_199 | Rep_728_c_199_10 | 12703 | 12957 | - | Ribosomal_L27 |
| TC | Rep_728_c_199 | Rep_728_c_199_11 | 13141 | 14886 | + | 3.A.1.106.2 |
Gene ID: Rep_728_c_199_6
Type: CAZyme
Location: 7194 - 8948 (+)
Type: CAZyme
Location: 7194 - 8948 (+)
Gene ID: Rep_728_c_199_7
Type: TF
Location: 8923 - 9804 (-)
Type: TF
Location: 8923 - 9804 (-)
Gene ID: Rep_728_c_199_8
Type: CAZyme
Location: 9932 - 11566 (+)
Type: CAZyme
Location: 9932 - 11566 (+)
Gene ID: Rep_728_c_199_9
Type: pfam
Location: 11575 - 12591 (-)
Type: pfam
Location: 11575 - 12591 (-)
Gene ID: Rep_728_c_199_10
Type: pfam
Location: 12703 - 12957 (-)
Type: pfam
Location: 12703 - 12957 (-)
Gene ID: Rep_728_c_199_11
Type: TC
Location: 13141 - 14886 (+)
Type: TC
Location: 13141 - 14886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp944389935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.