Cluster: Rep_728_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_728
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_728_c_48 | Rep_728_c_48_1 | 152 | 3016 | + | GH39 |
| pfam | Rep_728_c_48 | Rep_728_c_48_2 | 3212 | 4255 | + | Radical_SAM | LAM_C | Fer4_12 |
| TC | Rep_728_c_48 | Rep_728_c_48_3 | 4397 | 6205 | + | 3.A.18.1.1 |
| STP | Rep_728_c_48 | Rep_728_c_48_4 | 6296 | 7627 | + | AAA |
| CAZyme | Rep_728_c_48 | Rep_728_c_48_5 | 7643 | 9583 | - | GH5_19 |
| CAZyme | Rep_728_c_48 | Rep_728_c_48_6 | 9601 | 13356 | - | GH39 |
Gene ID: Rep_728_c_48_1
Type: CAZyme
Location: 152 - 3016 (+)
Type: CAZyme
Location: 152 - 3016 (+)
Gene ID: Rep_728_c_48_2
Type: pfam
Location: 3212 - 4255 (+)
Type: pfam
Location: 3212 - 4255 (+)
Gene ID: Rep_728_c_48_3
Type: TC
Location: 4397 - 6205 (+)
Type: TC
Location: 4397 - 6205 (+)
Gene ID: Rep_728_c_48_4
Type: STP
Location: 6296 - 7627 (+)
Type: STP
Location: 6296 - 7627 (+)
Gene ID: Rep_728_c_48_5
Type: CAZyme
Location: 7643 - 9583 (-)
Type: CAZyme
Location: 7643 - 9583 (-)
Gene ID: Rep_728_c_48_6
Type: CAZyme
Location: 9601 - 13356 (-)
Type: CAZyme
Location: 9601 - 13356 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp944389935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.