Cluster: Rep_728_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_728
- CGC Family ID: CGCFAM_02046
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_728_c_44 | Rep_728_c_44_15 | 18158 | 19564 | + | 2.A.66.1.3 |
| NULL(UNKNOWN) | Rep_728_c_44 | Rep_728_c_44_16 | 19590 | 20711 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_728_c_44 | Rep_728_c_44_17 | 20800 | 21603 | + | HTH_AraC |
| CAZyme | Rep_728_c_44 | Rep_728_c_44_18 | 21670 | 24702 | - | GH148 | GH148 |
Gene ID: Rep_728_c_44_15
Type: TC
Location: 18158 - 19564 (+)
Type: TC
Location: 18158 - 19564 (+)
Gene ID: Rep_728_c_44_16
Type:
Location: 19590 - 20711 (-)
Type:
Location: 19590 - 20711 (-)
Gene ID: Rep_728_c_44_17
Type: TF
Location: 20800 - 21603 (+)
Type: TF
Location: 20800 - 21603 (+)
Gene ID: Rep_728_c_44_18
Type: CAZyme
Location: 21670 - 24702 (-)
Type: CAZyme
Location: 21670 - 24702 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
Victivallis
Species
Victivallis sp944389935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.