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Cluster: Rep_726_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_726_c_153 Rep_726_c_153_6 6272 8722 - 3.A.12.1.1
TC Rep_726_c_153 Rep_726_c_153_7 9329 10024 + 9.B.18.1.2
TC Rep_726_c_153 Rep_726_c_153_8 10021 10803 + 1.B.18.3.2
TC Rep_726_c_153 Rep_726_c_153_9 10877 13243 + 8.A.3.3.4
pfam Rep_726_c_153 Rep_726_c_153_10 13311 13916 + CpsB_CapC
CAZyme Rep_726_c_153 Rep_726_c_153_11 13969 14745 + GT2
CAZyme Rep_726_c_153 Rep_726_c_153_12 14790 15938 + GT4
CAZyme Rep_726_c_153 Rep_726_c_153_13 15941 17128 + GT4
CAZyme Rep_726_c_153 Rep_726_c_153_14 17144 18283 + GT4
CAZyme Rep_726_c_153 Rep_726_c_153_15 18324 19496 + GT4
Gene ID: Rep_726_c_153_6
Type: TC
Location: 6272 - 8722 (-)
Gene ID: Rep_726_c_153_7
Type: TC
Location: 9329 - 10024 (+)
Gene ID: Rep_726_c_153_8
Type: TC
Location: 10021 - 10803 (+)
Gene ID: Rep_726_c_153_9
Type: TC
Location: 10877 - 13243 (+)
Gene ID: Rep_726_c_153_10
Type: pfam
Location: 13311 - 13916 (+)
Gene ID: Rep_726_c_153_11
Type: CAZyme
Location: 13969 - 14745 (+)
Gene ID: Rep_726_c_153_12
Type: CAZyme
Location: 14790 - 15938 (+)
Gene ID: Rep_726_c_153_13
Type: CAZyme
Location: 15941 - 17128 (+)
Gene ID: Rep_726_c_153_14
Type: CAZyme
Location: 17144 - 18283 (+)
Gene ID: Rep_726_c_153_15
Type: CAZyme
Location: 18324 - 19496 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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