dbCAN Logo

Cluster: Rep_726_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_726_c_107 Rep_726_c_107_2 149 2533 - 8.A.3.3.4
TC Rep_726_c_107 Rep_726_c_107_3 2538 3323 - 1.B.18.3.2
TC Rep_726_c_107 Rep_726_c_107_4 3333 5321 - 9.B.18.2.1
pfam Rep_726_c_107 Rep_726_c_107_5 5327 7120 - Aminotran_1_2 | DegT_DnrJ_EryC1 | Beta_elim_lyase | PglD_N
TC Rep_726_c_107 Rep_726_c_107_6 7117 7728 - 9.B.18.1.2
CAZyme Rep_726_c_107 Rep_726_c_107_7 7725 8843 - GT4
pfam Rep_726_c_107 Rep_726_c_107_8 8840 9970 - EpsG
CAZyme Rep_726_c_107 Rep_726_c_107_9 10327 11475 + GT2
pfam Rep_726_c_107 Rep_726_c_107_10 11618 12754 - DNA_alkylation
TC Rep_726_c_107 Rep_726_c_107_11 13048 14532 + 3.A.1.3.17
TC Rep_726_c_107 Rep_726_c_107_12 14525 15274 + 3.A.1.3.15
Gene ID: Rep_726_c_107_2
Type: TC
Location: 149 - 2533 (-)
Gene ID: Rep_726_c_107_3
Type: TC
Location: 2538 - 3323 (-)
Gene ID: Rep_726_c_107_4
Type: TC
Location: 3333 - 5321 (-)
Gene ID: Rep_726_c_107_5
Type: pfam
Location: 5327 - 7120 (-)
Gene ID: Rep_726_c_107_6
Type: TC
Location: 7117 - 7728 (-)
Gene ID: Rep_726_c_107_7
Type: CAZyme
Location: 7725 - 8843 (-)
Gene ID: Rep_726_c_107_8
Type: pfam
Location: 8840 - 9970 (-)
Gene ID: Rep_726_c_107_9
Type: CAZyme
Location: 10327 - 11475 (+)
Gene ID: Rep_726_c_107_10
Type: pfam
Location: 11618 - 12754 (-)
Gene ID: Rep_726_c_107_11
Type: TC
Location: 13048 - 14532 (+)
Gene ID: Rep_726_c_107_12
Type: TC
Location: 14525 - 15274 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List