Cluster: Rep_726_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_726
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_726_c_74 | Rep_726_c_74_80 | 95076 | 95642 | + | 2.A.51.1.6 |
| pfam | Rep_726_c_74 | Rep_726_c_74_81 | 95977 | 96900 | + | adh_short | KR | adh_short_C2 | SDR |
| TC | Rep_726_c_74 | Rep_726_c_74_82 | 96967 | 99033 | - | 9.A.8.1.5 |
| STP | Rep_726_c_74 | Rep_726_c_74_83 | 99113 | 99337 | - | FeoA |
| TF | Rep_726_c_74 | Rep_726_c_74_84 | 99366 | 100022 | - | Fe_dep_repress |
| CAZyme | Rep_726_c_74 | Rep_726_c_74_85 | 100263 | 101240 | + | PL38 |
| TC | Rep_726_c_74 | Rep_726_c_74_86 | 101297 | 102631 | - | 2.A.1.7.11 |
Gene ID: Rep_726_c_74_80
Type: TC
Location: 95076 - 95642 (+)
Type: TC
Location: 95076 - 95642 (+)
Gene ID: Rep_726_c_74_81
Type: pfam
Location: 95977 - 96900 (+)
Type: pfam
Location: 95977 - 96900 (+)
Gene ID: Rep_726_c_74_82
Type: TC
Location: 96967 - 99033 (-)
Type: TC
Location: 96967 - 99033 (-)
Gene ID: Rep_726_c_74_83
Type: STP
Location: 99113 - 99337 (-)
Type: STP
Location: 99113 - 99337 (-)
Gene ID: Rep_726_c_74_84
Type: TF
Location: 99366 - 100022 (-)
Type: TF
Location: 99366 - 100022 (-)
Gene ID: Rep_726_c_74_85
Type: CAZyme
Location: 100263 - 101240 (+)
Type: CAZyme
Location: 100263 - 101240 (+)
Gene ID: Rep_726_c_74_86
Type: TC
Location: 101297 - 102631 (-)
Type: TC
Location: 101297 - 102631 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_726_c_74_81 | vegetarian > vegan | 1.16777 | 0.00251 |