Cluster: Rep_726_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_726
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_726_c_74 | Rep_726_c_74_51 | 63503 | 64495 | - | GT8 |
| CAZyme | Rep_726_c_74 | Rep_726_c_74_52 | 64492 | 65541 | - | GT2 |
| CAZyme | Rep_726_c_74 | Rep_726_c_74_53 | 65538 | 66512 | - | GT9 |
| pfam | Rep_726_c_74 | Rep_726_c_74_54 | 66535 | 67521 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | Rep_726_c_74 | Rep_726_c_74_55 | 67817 | 68971 | + | GT2 |
| NULL(UNKNOWN) | Rep_726_c_74 | Rep_726_c_74_56 | 68996 | 69805 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_726_c_74 | Rep_726_c_74_57 | 69884 | 71272 | + | GT4 |
| CAZyme | Rep_726_c_74 | Rep_726_c_74_58 | 71378 | 72376 | + | GT10 |
| TC | Rep_726_c_74 | Rep_726_c_74_59 | 72456 | 74537 | + | 9.B.97.5.1 |
| CAZyme | Rep_726_c_74 | Rep_726_c_74_60 | 74694 | 75725 | + | GT10 |
| NULL(UNKNOWN) | Rep_726_c_74 | Rep_726_c_74_61 | 75733 | 76245 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_726_c_74 | Rep_726_c_74_62 | 76334 | 76567 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_726_c_74 | Rep_726_c_74_63 | 76692 | 78557 | - | 2.A.47.4.8 |
Gene ID: Rep_726_c_74_51
Type: CAZyme
Location: 63503 - 64495 (-)
Type: CAZyme
Location: 63503 - 64495 (-)
Gene ID: Rep_726_c_74_52
Type: CAZyme
Location: 64492 - 65541 (-)
Type: CAZyme
Location: 64492 - 65541 (-)
Gene ID: Rep_726_c_74_53
Type: CAZyme
Location: 65538 - 66512 (-)
Type: CAZyme
Location: 65538 - 66512 (-)
Gene ID: Rep_726_c_74_54
Type: pfam
Location: 66535 - 67521 (-)
Type: pfam
Location: 66535 - 67521 (-)
Gene ID: Rep_726_c_74_55
Type: CAZyme
Location: 67817 - 68971 (+)
Type: CAZyme
Location: 67817 - 68971 (+)
Gene ID: Rep_726_c_74_56
Type:
Location: 68996 - 69805 (+)
Type:
Location: 68996 - 69805 (+)
Gene ID: Rep_726_c_74_57
Type: CAZyme
Location: 69884 - 71272 (+)
Type: CAZyme
Location: 69884 - 71272 (+)
Gene ID: Rep_726_c_74_58
Type: CAZyme
Location: 71378 - 72376 (+)
Type: CAZyme
Location: 71378 - 72376 (+)
Gene ID: Rep_726_c_74_59
Type: TC
Location: 72456 - 74537 (+)
Type: TC
Location: 72456 - 74537 (+)
Gene ID: Rep_726_c_74_60
Type: CAZyme
Location: 74694 - 75725 (+)
Type: CAZyme
Location: 74694 - 75725 (+)
Gene ID: Rep_726_c_74_61
Type:
Location: 75733 - 76245 (-)
Type:
Location: 75733 - 76245 (-)
Gene ID: Rep_726_c_74_62
Type:
Location: 76334 - 76567 (-)
Type:
Location: 76334 - 76567 (-)
Gene ID: Rep_726_c_74_63
Type: TC
Location: 76692 - 78557 (-)
Type: TC
Location: 76692 - 78557 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_726_c_74_62 | vegetarian > vegan | 1.16824 | 0.00251 |