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Cluster: Rep_726_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_726_c_70 Rep_726_c_70_8 6447 7469 - GT10
pfam Rep_726_c_70 Rep_726_c_70_9 7830 8990 - HMGL-like | HCS_D2
pfam Rep_726_c_70 Rep_726_c_70_10 9350 11089 - DHH | DHHA1 | RecJ_OB
CAZyme Rep_726_c_70 Rep_726_c_70_11 11334 14195 - GH84
pfam Rep_726_c_70 Rep_726_c_70_12 14470 17082 + DUF2339
TC Rep_726_c_70 Rep_726_c_70_13 17141 18082 + 3.A.1.15.13
NULL(UNKNOWN) Rep_726_c_70 Rep_726_c_70_14 18079 18513 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_726_c_70 Rep_726_c_70_15 18504 19310 + 3.A.1.15.12
TC Rep_726_c_70 Rep_726_c_70_16 19307 20170 + 3.A.1.15.14
Gene ID: Rep_726_c_70_8
Type: CAZyme
Location: 6447 - 7469 (-)
Gene ID: Rep_726_c_70_9
Type: pfam
Location: 7830 - 8990 (-)
Gene ID: Rep_726_c_70_10
Type: pfam
Location: 9350 - 11089 (-)
Gene ID: Rep_726_c_70_11
Type: CAZyme
Location: 11334 - 14195 (-)
Gene ID: Rep_726_c_70_12
Type: pfam
Location: 14470 - 17082 (+)
Gene ID: Rep_726_c_70_13
Type: TC
Location: 17141 - 18082 (+)
Gene ID: Rep_726_c_70_14
Type:
Location: 18079 - 18513 (+)
Gene ID: Rep_726_c_70_15
Type: TC
Location: 18504 - 19310 (+)
Gene ID: Rep_726_c_70_16
Type: TC
Location: 19307 - 20170 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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