Cluster: Rep_725_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_725
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_725_c_49 | Rep_725_c_49_12 | 10502 | 11473 | + | CE4 |
| TC | Rep_725_c_49 | Rep_725_c_49_13 | 11721 | 14102 | + | 2.A.6.4.3 |
| pfam | Rep_725_c_49 | Rep_725_c_49_14 | 14384 | 15544 | - | EF-hand_1 | EF-hand_5 | EF-hand_5 | EF-hand_5 | EF-hand_5 | EF-hand_7 | EF-hand_7 |
| TC | Rep_725_c_49 | Rep_725_c_49_15 | 15828 | 16943 | - | 1.A.54.5.3 |
Gene ID: Rep_725_c_49_12
Type: CAZyme
Location: 10502 - 11473 (+)
Type: CAZyme
Location: 10502 - 11473 (+)
Gene ID: Rep_725_c_49_13
Type: TC
Location: 11721 - 14102 (+)
Type: TC
Location: 11721 - 14102 (+)
Gene ID: Rep_725_c_49_14
Type: pfam
Location: 14384 - 15544 (-)
Type: pfam
Location: 14384 - 15544 (-)
Gene ID: Rep_725_c_49_15
Type: TC
Location: 15828 - 16943 (-)
Type: TC
Location: 15828 - 16943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.