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Cluster: Rep_725_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_725_c_39 Rep_725_c_39_4 2081 3940 - GH77
NULL(UNKNOWN) Rep_725_c_39 Rep_725_c_39_5 4169 4801 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_725_c_39 Rep_725_c_39_6 4944 6302 - UPF0004 | Radical_SAM | TRAM_2
TC Rep_725_c_39 Rep_725_c_39_7 6329 7765 - 8.A.21.2.1
pfam Rep_725_c_39 Rep_725_c_39_8 7844 8881 - Phage_integrase
CAZyme Rep_725_c_39 Rep_725_c_39_9 9246 10046 + GT25
CAZyme Rep_725_c_39 Rep_725_c_39_10 10116 10925 + GT2
CAZyme Rep_725_c_39 Rep_725_c_39_11 10978 12024 + GT8
Gene ID: Rep_725_c_39_4
Type: CAZyme
Location: 2081 - 3940 (-)
Gene ID: Rep_725_c_39_5
Type:
Location: 4169 - 4801 (+)
Gene ID: Rep_725_c_39_6
Type: pfam
Location: 4944 - 6302 (-)
Gene ID: Rep_725_c_39_7
Type: TC
Location: 6329 - 7765 (-)
Gene ID: Rep_725_c_39_8
Type: pfam
Location: 7844 - 8881 (-)
Gene ID: Rep_725_c_39_9
Type: CAZyme
Location: 9246 - 10046 (+)
Gene ID: Rep_725_c_39_10
Type: CAZyme
Location: 10116 - 10925 (+)
Gene ID: Rep_725_c_39_11
Type: CAZyme
Location: 10978 - 12024 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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