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Cluster: Rep_725_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_725_c_32 Rep_725_c_32_112 130857 131843 - 2.A.28.3.4
pfam Rep_725_c_32 Rep_725_c_32_113 131878 133059 - tRNA-synt_1b
NULL(UNKNOWN) Rep_725_c_32 Rep_725_c_32_114 133328 133558 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_725_c_32 Rep_725_c_32_115 133612 133950 - 2.A.7.34.1
TC Rep_725_c_32 Rep_725_c_32_116 133995 134951 - 3.A.1.5.22
TC Rep_725_c_32 Rep_725_c_32_117 134948 135862 - 3.A.1.5.1
TC Rep_725_c_32 Rep_725_c_32_118 135868 137727 - 3.A.1.5.1
CAZyme Rep_725_c_32 Rep_725_c_32_119 137870 140008 + GH29
pfam Rep_725_c_32 Rep_725_c_32_120 140583 141548 - Thioredoxin | Thioredoxin_2 | Thioredoxin_7
pfam Rep_725_c_32 Rep_725_c_32_121 141762 142985 + Sacchrp_dh_NADP | Sacchrp_dh_C
TC Rep_725_c_32 Rep_725_c_32_122 143038 143475 + 2.A.7.1.11
Gene ID: Rep_725_c_32_112
Type: TC
Location: 130857 - 131843 (-)
Gene ID: Rep_725_c_32_113
Type: pfam
Location: 131878 - 133059 (-)
Gene ID: Rep_725_c_32_114
Type:
Location: 133328 - 133558 (-)
Gene ID: Rep_725_c_32_115
Type: TC
Location: 133612 - 133950 (-)
Gene ID: Rep_725_c_32_116
Type: TC
Location: 133995 - 134951 (-)
Gene ID: Rep_725_c_32_117
Type: TC
Location: 134948 - 135862 (-)
Gene ID: Rep_725_c_32_118
Type: TC
Location: 135868 - 137727 (-)
Gene ID: Rep_725_c_32_119
Type: CAZyme
Location: 137870 - 140008 (+)
Gene ID: Rep_725_c_32_120
Type: pfam
Location: 140583 - 141548 (-)
Gene ID: Rep_725_c_32_121
Type: pfam
Location: 141762 - 142985 (+)
Gene ID: Rep_725_c_32_122
Type: TC
Location: 143038 - 143475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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