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Cluster: Rep_725_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_725_c_32 Rep_725_c_32_8 7638 10499 - GH84
pfam Rep_725_c_32 Rep_725_c_32_9 10811 13417 + DUF2339
TC Rep_725_c_32 Rep_725_c_32_10 13485 14417 + 3.A.1.15.13
NULL(UNKNOWN) Rep_725_c_32 Rep_725_c_32_11 14414 14848 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_725_c_32 Rep_725_c_32_12 14839 15645 + 3.A.1.15.12
TC Rep_725_c_32 Rep_725_c_32_13 15642 16505 + 3.A.1.15.1
pfam Rep_725_c_32 Rep_725_c_32_14 16573 17109 + UVR
pfam Rep_725_c_32 Rep_725_c_32_15 17115 18170 + ATP-gua_Ptrans
TC Rep_725_c_32 Rep_725_c_32_16 18199 20781 + 3.A.9.1.2
Gene ID: Rep_725_c_32_8
Type: CAZyme
Location: 7638 - 10499 (-)
Gene ID: Rep_725_c_32_9
Type: pfam
Location: 10811 - 13417 (+)
Gene ID: Rep_725_c_32_10
Type: TC
Location: 13485 - 14417 (+)
Gene ID: Rep_725_c_32_11
Type:
Location: 14414 - 14848 (+)
Gene ID: Rep_725_c_32_12
Type: TC
Location: 14839 - 15645 (+)
Gene ID: Rep_725_c_32_13
Type: TC
Location: 15642 - 16505 (+)
Gene ID: Rep_725_c_32_14
Type: pfam
Location: 16573 - 17109 (+)
Gene ID: Rep_725_c_32_15
Type: pfam
Location: 17115 - 18170 (+)
Gene ID: Rep_725_c_32_16
Type: TC
Location: 18199 - 20781 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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