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Cluster: Rep_725_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_725_c_17 Rep_725_c_17_2 1435 4017 - 3.A.9.1.2
TC Rep_725_c_17 Rep_725_c_17_3 4382 4948 - 3.A.3.7.2
TC Rep_725_c_17 Rep_725_c_17_4 4978 7089 - 3.A.3.7.2
TC Rep_725_c_17 Rep_725_c_17_5 7123 8823 - 3.A.3.7.2
TC Rep_725_c_17 Rep_725_c_17_6 8937 9716 - 1.B.71.1.5
TF Rep_725_c_17 Rep_725_c_17_7 9870 10568 - Trans_reg_C
STP Rep_725_c_17 Rep_725_c_17_8 10587 13265 - HATPase_c | HisKA
CAZyme Rep_725_c_17 Rep_725_c_17_9 13464 16595 + GH33
Gene ID: Rep_725_c_17_2
Type: TC
Location: 1435 - 4017 (-)
Gene ID: Rep_725_c_17_3
Type: TC
Location: 4382 - 4948 (-)
Gene ID: Rep_725_c_17_4
Type: TC
Location: 4978 - 7089 (-)
Gene ID: Rep_725_c_17_5
Type: TC
Location: 7123 - 8823 (-)
Gene ID: Rep_725_c_17_6
Type: TC
Location: 8937 - 9716 (-)
Gene ID: Rep_725_c_17_7
Type: TF
Location: 9870 - 10568 (-)
Gene ID: Rep_725_c_17_8
Type: STP
Location: 10587 - 13265 (-)
Gene ID: Rep_725_c_17_9
Type: CAZyme
Location: 13464 - 16595 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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