Cluster: Rep_719_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_719
- CGC Family ID: CGCFAM_02660
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_719_c_23 | Rep_719_c_23_17 | 23248 | 24027 | + | 1.B.71.1.5 |
| TC | Rep_719_c_23 | Rep_719_c_23_18 | 24145 | 25845 | + | 3.A.3.7.2 |
| TC | Rep_719_c_23 | Rep_719_c_23_19 | 25879 | 27990 | + | 3.A.3.7.2 |
| TC | Rep_719_c_23 | Rep_719_c_23_20 | 28020 | 28586 | + | 3.A.3.7.2 |
| CAZyme | Rep_719_c_23 | Rep_719_c_23_21 | 28736 | 30337 | - | GH27 |
| TC | Rep_719_c_23 | Rep_719_c_23_22 | 30549 | 33092 | + | 3.A.9.1.2 |
Gene ID: Rep_719_c_23_17
Type: TC
Location: 23248 - 24027 (+)
Type: TC
Location: 23248 - 24027 (+)
Gene ID: Rep_719_c_23_18
Type: TC
Location: 24145 - 25845 (+)
Type: TC
Location: 24145 - 25845 (+)
Gene ID: Rep_719_c_23_19
Type: TC
Location: 25879 - 27990 (+)
Type: TC
Location: 25879 - 27990 (+)
Gene ID: Rep_719_c_23_20
Type: TC
Location: 28020 - 28586 (+)
Type: TC
Location: 28020 - 28586 (+)
Gene ID: Rep_719_c_23_21
Type: CAZyme
Location: 28736 - 30337 (-)
Type: CAZyme
Location: 28736 - 30337 (-)
Gene ID: Rep_719_c_23_22
Type: TC
Location: 30549 - 33092 (+)
Type: TC
Location: 30549 - 33092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia biwaensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.