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Cluster: Rep_719_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_719_c_15 Rep_719_c_15_21 22230 23261 - 1.A.33.1.5
CAZyme Rep_719_c_15 Rep_719_c_15_22 23542 26277 + GH2
pfam Rep_719_c_15 Rep_719_c_15_23 26293 26763 + MauE
pfam Rep_719_c_15 Rep_719_c_15_24 26998 27423 - DUF6941
TC Rep_719_c_15 Rep_719_c_15_25 27618 31154 + 3.A.1.204.4
NULL(UNKNOWN) Rep_719_c_15 Rep_719_c_15_26 31419 31982 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_719_c_15 Rep_719_c_15_27 32080 33144 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_719_c_15 Rep_719_c_15_28 33141 33773 + 3.A.1.134.6
Gene ID: Rep_719_c_15_21
Type: TC
Location: 22230 - 23261 (-)
Gene ID: Rep_719_c_15_22
Type: CAZyme
Location: 23542 - 26277 (+)
Gene ID: Rep_719_c_15_23
Type: pfam
Location: 26293 - 26763 (+)
Gene ID: Rep_719_c_15_24
Type: pfam
Location: 26998 - 27423 (-)
Gene ID: Rep_719_c_15_25
Type: TC
Location: 27618 - 31154 (+)
Gene ID: Rep_719_c_15_26
Type:
Location: 31419 - 31982 (+)
Gene ID: Rep_719_c_15_27
Type:
Location: 32080 - 33144 (+)
Gene ID: Rep_719_c_15_28
Type: TC
Location: 33141 - 33773 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_719_c_15_23 vegetarian > vegan 1.15030 0.03217

🧭 Explore Read Mapping of CGC

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