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Cluster: Rep_719_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_719_c_12 Rep_719_c_12_2 852 3512 - 9.B.14.3.3
pfam Rep_719_c_12 Rep_719_c_12_3 3604 4179 - Ferritin | Rubrerythrin | RUBY_RBDX
NULL(UNKNOWN) Rep_719_c_12 Rep_719_c_12_4 4264 4875 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_719_c_12 Rep_719_c_12_5 4907 7432 - 3.A.12.1.1
TC Rep_719_c_12 Rep_719_c_12_6 7958 8617 + 9.B.18.1.1
pfam Rep_719_c_12 Rep_719_c_12_7 8656 9441 + Poly_export | SLBB_2
TC Rep_719_c_12 Rep_719_c_12_8 9504 11873 + 8.A.3.3.3
pfam Rep_719_c_12 Rep_719_c_12_9 11939 12544 + CpsB_CapC
CAZyme Rep_719_c_12 Rep_719_c_12_10 12585 13370 + GT2
CAZyme Rep_719_c_12 Rep_719_c_12_11 13423 14394 + GT2
CAZyme Rep_719_c_12 Rep_719_c_12_12 14391 15593 + GT4
pfam Rep_719_c_12 Rep_719_c_12_13 15590 16606 + Acyl_transf_3
CAZyme Rep_719_c_12 Rep_719_c_12_14 16603 17922 + GT4
CAZyme Rep_719_c_12 Rep_719_c_12_15 17937 19199 + GT4
pfam Rep_719_c_12 Rep_719_c_12_16 19196 20422 + Wzy_C
CAZyme Rep_719_c_12 Rep_719_c_12_17 20419 21546 + GT4
CAZyme Rep_719_c_12 Rep_719_c_12_18 21557 22705 + GT4
NULL(UNKNOWN) Rep_719_c_12 Rep_719_c_12_19 22702 23259 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_719_c_12 Rep_719_c_12_20 23252 24154 + GT2
NULL(UNKNOWN) Rep_719_c_12 Rep_719_c_12_21 24183 24413 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_719_c_12 Rep_719_c_12_22 24749 25195 + Acyl_transf_3
CAZyme Rep_719_c_12 Rep_719_c_12_23 25319 26377 + GT2
CAZyme Rep_719_c_12 Rep_719_c_12_24 26370 27380 + GT2
Gene ID: Rep_719_c_12_2
Type: TC
Location: 852 - 3512 (-)
Gene ID: Rep_719_c_12_3
Type: pfam
Location: 3604 - 4179 (-)
Gene ID: Rep_719_c_12_4
Type:
Location: 4264 - 4875 (-)
Gene ID: Rep_719_c_12_5
Type: TC
Location: 4907 - 7432 (-)
Gene ID: Rep_719_c_12_6
Type: TC
Location: 7958 - 8617 (+)
Gene ID: Rep_719_c_12_7
Type: pfam
Location: 8656 - 9441 (+)
Gene ID: Rep_719_c_12_8
Type: TC
Location: 9504 - 11873 (+)
Gene ID: Rep_719_c_12_9
Type: pfam
Location: 11939 - 12544 (+)
Gene ID: Rep_719_c_12_10
Type: CAZyme
Location: 12585 - 13370 (+)
Gene ID: Rep_719_c_12_11
Type: CAZyme
Location: 13423 - 14394 (+)
Gene ID: Rep_719_c_12_12
Type: CAZyme
Location: 14391 - 15593 (+)
Gene ID: Rep_719_c_12_13
Type: pfam
Location: 15590 - 16606 (+)
Gene ID: Rep_719_c_12_14
Type: CAZyme
Location: 16603 - 17922 (+)
Gene ID: Rep_719_c_12_15
Type: CAZyme
Location: 17937 - 19199 (+)
Gene ID: Rep_719_c_12_16
Type: pfam
Location: 19196 - 20422 (+)
Gene ID: Rep_719_c_12_17
Type: CAZyme
Location: 20419 - 21546 (+)
Gene ID: Rep_719_c_12_18
Type: CAZyme
Location: 21557 - 22705 (+)
Gene ID: Rep_719_c_12_19
Type:
Location: 22702 - 23259 (+)
Gene ID: Rep_719_c_12_20
Type: CAZyme
Location: 23252 - 24154 (+)
Gene ID: Rep_719_c_12_21
Type:
Location: 24183 - 24413 (-)
Gene ID: Rep_719_c_12_22
Type: pfam
Location: 24749 - 25195 (+)
Gene ID: Rep_719_c_12_23
Type: CAZyme
Location: 25319 - 26377 (+)
Gene ID: Rep_719_c_12_24
Type: CAZyme
Location: 26370 - 27380 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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