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Cluster: Rep_719_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_719_c_10 Rep_719_c_10_33 35111 37240 - GH29
TC Rep_719_c_10 Rep_719_c_10_34 37385 39244 + 3.A.1.5.1
TC Rep_719_c_10 Rep_719_c_10_35 39250 40164 + 3.A.1.5.1
TC Rep_719_c_10 Rep_719_c_10_36 40161 41117 + 3.A.1.5.22
TC Rep_719_c_10 Rep_719_c_10_37 41155 41493 + 2.A.7.34.1
NULL(UNKNOWN) Rep_719_c_10 Rep_719_c_10_38 41545 41775 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_719_c_10 Rep_719_c_10_39 42072 43223 + tRNA-synt_1b
TC Rep_719_c_10 Rep_719_c_10_40 43260 44246 + 2.A.28.3.4
Gene ID: Rep_719_c_10_33
Type: CAZyme
Location: 35111 - 37240 (-)
Gene ID: Rep_719_c_10_34
Type: TC
Location: 37385 - 39244 (+)
Gene ID: Rep_719_c_10_35
Type: TC
Location: 39250 - 40164 (+)
Gene ID: Rep_719_c_10_36
Type: TC
Location: 40161 - 41117 (+)
Gene ID: Rep_719_c_10_37
Type: TC
Location: 41155 - 41493 (+)
Gene ID: Rep_719_c_10_38
Type:
Location: 41545 - 41775 (+)
Gene ID: Rep_719_c_10_39
Type: pfam
Location: 42072 - 43223 (+)
Gene ID: Rep_719_c_10_40
Type: TC
Location: 43260 - 44246 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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