Cluster: Rep_719_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_719
- CGC Family ID: CGCFAM_01008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_719_c_0 | Rep_719_c_0_110 | 145364 | 146968 | + | 3.D.10.1.1 |
| NULL(UNKNOWN) | Rep_719_c_0 | Rep_719_c_0_111 | 146962 | 147990 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_719_c_0 | Rep_719_c_0_112 | 148131 | 149342 | + | GT4 |
| TC | Rep_719_c_0 | Rep_719_c_0_113 | 149337 | 151235 | - | 2.A.16.2.2 |
Gene ID: Rep_719_c_0_110
Type: TC
Location: 145364 - 146968 (+)
Type: TC
Location: 145364 - 146968 (+)
Gene ID: Rep_719_c_0_111
Type:
Location: 146962 - 147990 (+)
Type:
Location: 146962 - 147990 (+)
Gene ID: Rep_719_c_0_112
Type: CAZyme
Location: 148131 - 149342 (+)
Type: CAZyme
Location: 148131 - 149342 (+)
Gene ID: Rep_719_c_0_113
Type: TC
Location: 149337 - 151235 (-)
Type: TC
Location: 149337 - 151235 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia biwaensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.