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Cluster: Rep_719_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_719_c_4 Rep_719_c_4_69 82240 83418 - GT2
pfam Rep_719_c_4 Rep_719_c_4_70 83718 84878 + EpsG
CAZyme Rep_719_c_4 Rep_719_c_4_71 84875 85993 + GT4
TC Rep_719_c_4 Rep_719_c_4_72 85990 86601 + 9.B.18.1.2
pfam Rep_719_c_4 Rep_719_c_4_73 86598 88385 + Aminotran_1_2 | DegT_DnrJ_EryC1 | Beta_elim_lyase | PglD_N
TC Rep_719_c_4 Rep_719_c_4_74 88397 90382 + 9.B.18.2.1
TC Rep_719_c_4 Rep_719_c_4_75 90402 91187 + 1.B.18.3.8
TC Rep_719_c_4 Rep_719_c_4_76 91194 93575 + 8.A.3.3.4
CAZyme Rep_719_c_4 Rep_719_c_4_77 93596 94750 + GT4
CAZyme Rep_719_c_4 Rep_719_c_4_78 94747 95898 + GT4
CAZyme Rep_719_c_4 Rep_719_c_4_79 95904 96929 + GT2
pfam Rep_719_c_4 Rep_719_c_4_80 96922 98091 + PS_pyruv_trans
CAZyme Rep_719_c_4 Rep_719_c_4_81 98088 99278 + GH105
NULL(UNKNOWN) Rep_719_c_4 Rep_719_c_4_82 99275 100789 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_719_c_4 Rep_719_c_4_83 100780 101973 + GT4
CAZyme Rep_719_c_4 Rep_719_c_4_84 101976 103088 + GT4
CAZyme Rep_719_c_4 Rep_719_c_4_85 103085 104125 + GT2
CAZyme Rep_719_c_4 Rep_719_c_4_86 104143 105240 + GT4
CAZyme Rep_719_c_4 Rep_719_c_4_87 105237 106133 + GT2
CAZyme Rep_719_c_4 Rep_719_c_4_88 106141 107310 + GT4
CAZyme Rep_719_c_4 Rep_719_c_4_89 107316 108383 + GT2
Gene ID: Rep_719_c_4_69
Type: CAZyme
Location: 82240 - 83418 (-)
Gene ID: Rep_719_c_4_70
Type: pfam
Location: 83718 - 84878 (+)
Gene ID: Rep_719_c_4_71
Type: CAZyme
Location: 84875 - 85993 (+)
Gene ID: Rep_719_c_4_72
Type: TC
Location: 85990 - 86601 (+)
Gene ID: Rep_719_c_4_73
Type: pfam
Location: 86598 - 88385 (+)
Gene ID: Rep_719_c_4_74
Type: TC
Location: 88397 - 90382 (+)
Gene ID: Rep_719_c_4_75
Type: TC
Location: 90402 - 91187 (+)
Gene ID: Rep_719_c_4_76
Type: TC
Location: 91194 - 93575 (+)
Gene ID: Rep_719_c_4_77
Type: CAZyme
Location: 93596 - 94750 (+)
Gene ID: Rep_719_c_4_78
Type: CAZyme
Location: 94747 - 95898 (+)
Gene ID: Rep_719_c_4_79
Type: CAZyme
Location: 95904 - 96929 (+)
Gene ID: Rep_719_c_4_80
Type: pfam
Location: 96922 - 98091 (+)
Gene ID: Rep_719_c_4_81
Type: CAZyme
Location: 98088 - 99278 (+)
Gene ID: Rep_719_c_4_82
Type:
Location: 99275 - 100789 (+)
Gene ID: Rep_719_c_4_83
Type: CAZyme
Location: 100780 - 101973 (+)
Gene ID: Rep_719_c_4_84
Type: CAZyme
Location: 101976 - 103088 (+)
Gene ID: Rep_719_c_4_85
Type: CAZyme
Location: 103085 - 104125 (+)
Gene ID: Rep_719_c_4_86
Type: CAZyme
Location: 104143 - 105240 (+)
Gene ID: Rep_719_c_4_87
Type: CAZyme
Location: 105237 - 106133 (+)
Gene ID: Rep_719_c_4_88
Type: CAZyme
Location: 106141 - 107310 (+)
Gene ID: Rep_719_c_4_89
Type: CAZyme
Location: 107316 - 108383 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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