Cluster: Rep_695_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_695
- CGC Family ID: CGCFAM_09728
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_695_c_0 | Rep_695_c_0_162 | 189055 | 190212 | + | 1.B.1.4.1 |
| pfam | Rep_695_c_0 | Rep_695_c_0_163 | 190442 | 198049 | + | adh_short | ADH_zinc_N | ketoacyl-synt | PP-binding | Acyl_transf_1 | Ketoacyl-synt_C | ADH_N | KR | adh_short_C2 | ADH_zinc_N_2 | PS-DH | KAsynt_C_assoc | PKS_DH_N | ACP_SdgA_C |
| STP | Rep_695_c_0 | Rep_695_c_0_164 | 198095 | 199489 | + | Aminotran_1_2 |
| CAZyme | Rep_695_c_0 | Rep_695_c_0_165 | 199603 | 201693 | + | GT107 | GT107 |
| pfam | Rep_695_c_0 | Rep_695_c_0_166 | 201731 | 202087 | + | DUF5061 |
| TC | Rep_695_c_0 | Rep_695_c_0_167 | 202029 | 202889 | + | 3.A.1.101.1 |
| TC | Rep_695_c_0 | Rep_695_c_0_168 | 202886 | 203548 | + | 3.A.1.101.1 |
| TC | Rep_695_c_0 | Rep_695_c_0_169 | 203535 | 204761 | + | 8.A.4.2.1 |
| TC | Rep_695_c_0 | Rep_695_c_0_170 | 204777 | 206576 | + | 1.B.18.1.2 |
| pfam | Rep_695_c_0 | Rep_695_c_0_171 | 206598 | 207452 | + | NeuB |
| CAZyme | Rep_695_c_0 | Rep_695_c_0_172 | 207529 | 208215 | + | GT42 |
| CAZyme | Rep_695_c_0 | Rep_695_c_0_173 | 208233 | 209507 | + | GT8 |
Gene ID: Rep_695_c_0_162
Type: TC
Location: 189055 - 190212 (+)
Type: TC
Location: 189055 - 190212 (+)
Gene ID: Rep_695_c_0_163
Type: pfam
Location: 190442 - 198049 (+)
Type: pfam
Location: 190442 - 198049 (+)
Gene ID: Rep_695_c_0_164
Type: STP
Location: 198095 - 199489 (+)
Type: STP
Location: 198095 - 199489 (+)
Gene ID: Rep_695_c_0_165
Type: CAZyme
Location: 199603 - 201693 (+)
Type: CAZyme
Location: 199603 - 201693 (+)
Gene ID: Rep_695_c_0_166
Type: pfam
Location: 201731 - 202087 (+)
Type: pfam
Location: 201731 - 202087 (+)
Gene ID: Rep_695_c_0_167
Type: TC
Location: 202029 - 202889 (+)
Type: TC
Location: 202029 - 202889 (+)
Gene ID: Rep_695_c_0_168
Type: TC
Location: 202886 - 203548 (+)
Type: TC
Location: 202886 - 203548 (+)
Gene ID: Rep_695_c_0_169
Type: TC
Location: 203535 - 204761 (+)
Type: TC
Location: 203535 - 204761 (+)
Gene ID: Rep_695_c_0_170
Type: TC
Location: 204777 - 206576 (+)
Type: TC
Location: 204777 - 206576 (+)
Gene ID: Rep_695_c_0_171
Type: pfam
Location: 206598 - 207452 (+)
Type: pfam
Location: 206598 - 207452 (+)
Gene ID: Rep_695_c_0_172
Type: CAZyme
Location: 207529 - 208215 (+)
Type: CAZyme
Location: 207529 - 208215 (+)
Gene ID: Rep_695_c_0_173
Type: CAZyme
Location: 208233 - 209507 (+)
Type: CAZyme
Location: 208233 - 209507 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Duodenibacillus
Species
Duodenibacillus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.