Cluster: Rep_68_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: Rep_68
- CGC Family ID: CGCFAM_00001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_68_c_119 | Rep_68_c_119_4 | 2449 | 3702 | - | CE1 |
| CAZyme | Rep_68_c_119 | Rep_68_c_119_5 | 4231 | 5430 | - | CE1 |
| CAZyme | Rep_68_c_119 | Rep_68_c_119_6 | 5441 | 6292 | - | CE1 |
| NULL(UNKNOWN) | Rep_68_c_119 | Rep_68_c_119_7 | 6323 | 7726 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_68_c_119 | Rep_68_c_119_8 | 7746 | 9317 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_68_c_119 | Rep_68_c_119_9 | 9341 | 12409 | - | 1.B.14.6.1 |
Gene ID: Rep_68_c_119_4
Type: CAZyme
Location: 2449 - 3702 (-)
Type: CAZyme
Location: 2449 - 3702 (-)
Gene ID: Rep_68_c_119_5
Type: CAZyme
Location: 4231 - 5430 (-)
Type: CAZyme
Location: 4231 - 5430 (-)
Gene ID: Rep_68_c_119_6
Type: CAZyme
Location: 5441 - 6292 (-)
Type: CAZyme
Location: 5441 - 6292 (-)
Gene ID: Rep_68_c_119_7
Type:
Location: 6323 - 7726 (-)
Type:
Location: 6323 - 7726 (-)
Gene ID: Rep_68_c_119_8
Type: pfam
Location: 7746 - 9317 (-)
Type: pfam
Location: 7746 - 9317 (-)
Gene ID: Rep_68_c_119_9
Type: TC
Location: 9341 - 12409 (-)
Type: TC
Location: 9341 - 12409 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.