Cluster: Rep_68_CGC37
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: Rep_68
- CGC Family ID: CGCFAM_00001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_68_c_102 | Rep_68_c_102_16 | 18158 | 21223 | - | 1.B.14.6.1 |
| pfam | Rep_68_c_102 | Rep_68_c_102_17 | 21241 | 23094 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_68_c_102 | Rep_68_c_102_18 | 23119 | 26313 | - | 1.B.14.6.1 |
| CAZyme | Rep_68_c_102 | Rep_68_c_102_19 | 26331 | 28661 | - | GH92 |
| TF | Rep_68_c_102 | Rep_68_c_102_20 | 28789 | 32700 | - | HTH_AraC |
| peptidase | Rep_68_c_102 | Rep_68_c_102_21 | 32806 | 36045 | + | S41.UPB |
| CAZyme | Rep_68_c_102 | Rep_68_c_102_22 | 36049 | 36672 | + | GT2 |
Gene ID: Rep_68_c_102_16
Type: TC
Location: 18158 - 21223 (-)
Type: TC
Location: 18158 - 21223 (-)
Gene ID: Rep_68_c_102_17
Type: pfam
Location: 21241 - 23094 (-)
Type: pfam
Location: 21241 - 23094 (-)
Gene ID: Rep_68_c_102_18
Type: TC
Location: 23119 - 26313 (-)
Type: TC
Location: 23119 - 26313 (-)
Gene ID: Rep_68_c_102_19
Type: CAZyme
Location: 26331 - 28661 (-)
Type: CAZyme
Location: 26331 - 28661 (-)
Gene ID: Rep_68_c_102_20
Type: TF
Location: 28789 - 32700 (-)
Type: TF
Location: 28789 - 32700 (-)
Gene ID: Rep_68_c_102_21
Type: peptidase
Location: 32806 - 36045 (+)
Type: peptidase
Location: 32806 - 36045 (+)
Gene ID: Rep_68_c_102_22
Type: CAZyme
Location: 36049 - 36672 (+)
Type: CAZyme
Location: 36049 - 36672 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.