Cluster: Rep_68_CGC29
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_68
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_68_c_84 | Rep_68_c_84_12 | 19890 | 21398 | - | 8.A.46.1.3 |
| TC | Rep_68_c_84 | Rep_68_c_84_13 | 21414 | 24482 | - | 1.B.14.6.1 |
| pfam | Rep_68_c_84 | Rep_68_c_84_14 | 24629 | 26023 | - | Lipase_GDSL | Lipase_GDSL_2 |
| NULL(UNKNOWN) | Rep_68_c_84 | Rep_68_c_84_15 | 26084 | 26251 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_68_c_84 | Rep_68_c_84_16 | 26235 | 28766 | - | GH38 |
| CAZyme | Rep_68_c_84 | Rep_68_c_84_17 | 28996 | 30045 | + | GH130_4 |
| pfam | Rep_68_c_84 | Rep_68_c_84_18 | 30105 | 31760 | + | GxGYxYP_C | GxGYxYP_N | GxGYxYP_N_2nd | GxGYxYP_N_3rd |
| CAZyme | Rep_68_c_84 | Rep_68_c_84_19 | 31951 | 33936 | + | CE20 | CE20 |
| pfam | Rep_68_c_84 | Rep_68_c_84_20 | 34185 | 35783 | - | APH | PapZ_C |
| pfam | Rep_68_c_84 | Rep_68_c_84_21 | 35894 | 37432 | + | NAPRTase_N | NAPRTase_C |
| TC | Rep_68_c_84 | Rep_68_c_84_22 | 37457 | 40765 | + | 1.B.14.6.1 |
Gene ID: Rep_68_c_84_12
Type: TC
Location: 19890 - 21398 (-)
Type: TC
Location: 19890 - 21398 (-)
Gene ID: Rep_68_c_84_13
Type: TC
Location: 21414 - 24482 (-)
Type: TC
Location: 21414 - 24482 (-)
Gene ID: Rep_68_c_84_14
Type: pfam
Location: 24629 - 26023 (-)
Type: pfam
Location: 24629 - 26023 (-)
Gene ID: Rep_68_c_84_15
Type:
Location: 26084 - 26251 (+)
Type:
Location: 26084 - 26251 (+)
Gene ID: Rep_68_c_84_16
Type: CAZyme
Location: 26235 - 28766 (-)
Type: CAZyme
Location: 26235 - 28766 (-)
Gene ID: Rep_68_c_84_17
Type: CAZyme
Location: 28996 - 30045 (+)
Type: CAZyme
Location: 28996 - 30045 (+)
Gene ID: Rep_68_c_84_18
Type: pfam
Location: 30105 - 31760 (+)
Type: pfam
Location: 30105 - 31760 (+)
Gene ID: Rep_68_c_84_19
Type: CAZyme
Location: 31951 - 33936 (+)
Type: CAZyme
Location: 31951 - 33936 (+)
Gene ID: Rep_68_c_84_20
Type: pfam
Location: 34185 - 35783 (-)
Type: pfam
Location: 34185 - 35783 (-)
Gene ID: Rep_68_c_84_21
Type: pfam
Location: 35894 - 37432 (+)
Type: pfam
Location: 35894 - 37432 (+)
Gene ID: Rep_68_c_84_22
Type: TC
Location: 37457 - 40765 (+)
Type: TC
Location: 37457 - 40765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.