Cluster: Rep_68_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_68
- CGC Family ID: CGCFAM_00579
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_68_c_73 | Rep_68_c_73_29 | 29969 | 32935 | + | 1.B.14.6.1 |
| pfam | Rep_68_c_73 | Rep_68_c_73_30 | 32944 | 34539 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| pfam | Rep_68_c_73 | Rep_68_c_73_31 | 34558 | 35685 | + | SusE |
| CAZyme | Rep_68_c_73 | Rep_68_c_73_32 | 35682 | 36923 | + | GH76 |
| CAZyme | Rep_68_c_73 | Rep_68_c_73_33 | 36920 | 38104 | + | GH76 |
| CAZyme | Rep_68_c_73 | Rep_68_c_73_34 | 38109 | 40484 | + | GH92 |
| TC | Rep_68_c_73 | Rep_68_c_73_35 | 40496 | 41647 | + | 2.A.1.7.16 |
Gene ID: Rep_68_c_73_29
Type: TC
Location: 29969 - 32935 (+)
Type: TC
Location: 29969 - 32935 (+)
Gene ID: Rep_68_c_73_30
Type: pfam
Location: 32944 - 34539 (+)
Type: pfam
Location: 32944 - 34539 (+)
Gene ID: Rep_68_c_73_31
Type: pfam
Location: 34558 - 35685 (+)
Type: pfam
Location: 34558 - 35685 (+)
Gene ID: Rep_68_c_73_32
Type: CAZyme
Location: 35682 - 36923 (+)
Type: CAZyme
Location: 35682 - 36923 (+)
Gene ID: Rep_68_c_73_33
Type: CAZyme
Location: 36920 - 38104 (+)
Type: CAZyme
Location: 36920 - 38104 (+)
Gene ID: Rep_68_c_73_34
Type: CAZyme
Location: 38109 - 40484 (+)
Type: CAZyme
Location: 38109 - 40484 (+)
Gene ID: Rep_68_c_73_35
Type: TC
Location: 40496 - 41647 (+)
Type: TC
Location: 40496 - 41647 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.