Cluster: Rep_68_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: Rep_68
- CGC Family ID: CGCFAM_00043
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_68_c_60 | Rep_68_c_60_32 | 41268 | 44270 | + | 1.B.14.6.1 |
| TC | Rep_68_c_60 | Rep_68_c_60_33 | 44281 | 45771 | + | 8.A.46.1.2 |
| pfam | Rep_68_c_60 | Rep_68_c_60_34 | 45842 | 47329 | + | SusE | SusF_SusE | SusF_SusE |
| CAZyme | Rep_68_c_60 | Rep_68_c_60_35 | 47326 | 49125 | + | GH66 |
| CAZyme | Rep_68_c_60 | Rep_68_c_60_36 | 49122 | 51581 | + | GH31 |
| CAZyme | Rep_68_c_60 | Rep_68_c_60_37 | 51574 | 53775 | + | GH97 |
Gene ID: Rep_68_c_60_32
Type: TC
Location: 41268 - 44270 (+)
Type: TC
Location: 41268 - 44270 (+)
Gene ID: Rep_68_c_60_33
Type: TC
Location: 44281 - 45771 (+)
Type: TC
Location: 44281 - 45771 (+)
Gene ID: Rep_68_c_60_34
Type: pfam
Location: 45842 - 47329 (+)
Type: pfam
Location: 45842 - 47329 (+)
Gene ID: Rep_68_c_60_35
Type: CAZyme
Location: 47326 - 49125 (+)
Type: CAZyme
Location: 47326 - 49125 (+)
Gene ID: Rep_68_c_60_36
Type: CAZyme
Location: 49122 - 51581 (+)
Type: CAZyme
Location: 49122 - 51581 (+)
Gene ID: Rep_68_c_60_37
Type: CAZyme
Location: 51574 - 53775 (+)
Type: CAZyme
Location: 51574 - 53775 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.