Cluster: Rep_68_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: Rep_68
- CGC Family ID: CGCFAM_00016
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_68_c_4 | Rep_68_c_4_1 | 135 | 3206 | - | 1.B.14.6.13 |
| CAZyme | Rep_68_c_4 | Rep_68_c_4_2 | 3379 | 5700 | - | GH20 |
| TF | Rep_68_c_4 | Rep_68_c_4_3 | 5814 | 6368 | - | GerE |
| STP | Rep_68_c_4 | Rep_68_c_4_4 | 6482 | 7378 | + | FecR |
| TC | Rep_68_c_4 | Rep_68_c_4_5 | 7395 | 10697 | + | 1.B.14.6.13 |
| TC | Rep_68_c_4 | Rep_68_c_4_6 | 10710 | 12272 | + | 8.A.46.2.2 |
Gene ID: Rep_68_c_4_1
Type: TC
Location: 135 - 3206 (-)
Type: TC
Location: 135 - 3206 (-)
Gene ID: Rep_68_c_4_2
Type: CAZyme
Location: 3379 - 5700 (-)
Type: CAZyme
Location: 3379 - 5700 (-)
Gene ID: Rep_68_c_4_3
Type: TF
Location: 5814 - 6368 (-)
Type: TF
Location: 5814 - 6368 (-)
Gene ID: Rep_68_c_4_4
Type: STP
Location: 6482 - 7378 (+)
Type: STP
Location: 6482 - 7378 (+)
Gene ID: Rep_68_c_4_5
Type: TC
Location: 7395 - 10697 (+)
Type: TC
Location: 7395 - 10697 (+)
Gene ID: Rep_68_c_4_6
Type: TC
Location: 10710 - 12272 (+)
Type: TC
Location: 10710 - 12272 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.