Cluster: Rep_68_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_68
- CGC Family ID: CGCFAM_02368
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_68_c_60 | Rep_68_c_60_17 | 17241 | 20234 | + | 1.B.14.6.1 |
| pfam | Rep_68_c_60 | Rep_68_c_60_18 | 20247 | 21905 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_68_c_60 | Rep_68_c_60_19 | 21951 | 23822 | + | GxGYxYP_C | GxGYxYP_N_3rd |
| CAZyme | Rep_68_c_60 | Rep_68_c_60_20 | 23822 | 26104 | + | GH92 |
| CAZyme | Rep_68_c_60 | Rep_68_c_60_21 | 26120 | 27586 | + | GH29 |
| CAZyme | Rep_68_c_60 | Rep_68_c_60_22 | 27589 | 30693 | + | GH2 |
Gene ID: Rep_68_c_60_17
Type: TC
Location: 17241 - 20234 (+)
Type: TC
Location: 17241 - 20234 (+)
Gene ID: Rep_68_c_60_18
Type: pfam
Location: 20247 - 21905 (+)
Type: pfam
Location: 20247 - 21905 (+)
Gene ID: Rep_68_c_60_19
Type: pfam
Location: 21951 - 23822 (+)
Type: pfam
Location: 21951 - 23822 (+)
Gene ID: Rep_68_c_60_20
Type: CAZyme
Location: 23822 - 26104 (+)
Type: CAZyme
Location: 23822 - 26104 (+)
Gene ID: Rep_68_c_60_21
Type: CAZyme
Location: 26120 - 27586 (+)
Type: CAZyme
Location: 26120 - 27586 (+)
Gene ID: Rep_68_c_60_22
Type: CAZyme
Location: 27589 - 30693 (+)
Type: CAZyme
Location: 27589 - 30693 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.