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Cluster: Rep_68_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_68_c_36 Rep_68_c_36_9 10288 11931 + 4.C.1.1.7
STP Rep_68_c_36 Rep_68_c_36_10 12386 14386 + HATPase_c
TC Rep_68_c_36 Rep_68_c_36_11 15123 18299 + 1.B.14.6.1
pfam Rep_68_c_36 Rep_68_c_36_12 18312 20273 + SusD_RagB | SusD-like_3
pfam Rep_68_c_36 Rep_68_c_36_13 20273 21025 + DUF3823 | DUF3823_C
CAZyme Rep_68_c_36 Rep_68_c_36_14 21119 24142 + GH55_3
CAZyme Rep_68_c_36 Rep_68_c_36_15 24161 27160 + GH55_3
CAZyme Rep_68_c_36 Rep_68_c_36_16 27172 29130 + GH50
CAZyme Rep_68_c_36 Rep_68_c_36_17 29166 32150 + GH55_3
Gene ID: Rep_68_c_36_9
Type: TC
Location: 10288 - 11931 (+)
Gene ID: Rep_68_c_36_10
Type: STP
Location: 12386 - 14386 (+)
Gene ID: Rep_68_c_36_11
Type: TC
Location: 15123 - 18299 (+)
Gene ID: Rep_68_c_36_12
Type: pfam
Location: 18312 - 20273 (+)
Gene ID: Rep_68_c_36_13
Type: pfam
Location: 20273 - 21025 (+)
Gene ID: Rep_68_c_36_14
Type: CAZyme
Location: 21119 - 24142 (+)
Gene ID: Rep_68_c_36_15
Type: CAZyme
Location: 24161 - 27160 (+)
Gene ID: Rep_68_c_36_16
Type: CAZyme
Location: 27172 - 29130 (+)
Gene ID: Rep_68_c_36_17
Type: CAZyme
Location: 29166 - 32150 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Cryptobacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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