Cluster: Rep_678_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_678
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_678_c_0 | Rep_678_c_0_1068 | 1218989 | 1219588 | - | 4.F.1.1.8 |
| pfam | Rep_678_c_0 | Rep_678_c_0_1069 | 1219572 | 1221524 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| CAZyme | Rep_678_c_0 | Rep_678_c_0_1070 | 1221725 | 1222813 | + | GT104 |
| pfam | Rep_678_c_0 | Rep_678_c_0_1071 | 1223036 | 1223593 | + | EFP | EFP_N | Elong-fact-P_C |
| TC | Rep_678_c_0 | Rep_678_c_0_1072 | 1223894 | 1225471 | + | 2.A.35.2.1 |
Gene ID: Rep_678_c_0_1068
Type: TC
Location: 1218989 - 1219588 (-)
Type: TC
Location: 1218989 - 1219588 (-)
Gene ID: Rep_678_c_0_1069
Type: pfam
Location: 1219572 - 1221524 (-)
Type: pfam
Location: 1219572 - 1221524 (-)
Gene ID: Rep_678_c_0_1070
Type: CAZyme
Location: 1221725 - 1222813 (+)
Type: CAZyme
Location: 1221725 - 1222813 (+)
Gene ID: Rep_678_c_0_1071
Type: pfam
Location: 1223036 - 1223593 (+)
Type: pfam
Location: 1223036 - 1223593 (+)
Gene ID: Rep_678_c_0_1072
Type: TC
Location: 1223894 - 1225471 (+)
Type: TC
Location: 1223894 - 1225471 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Parasutterella
Species
Parasutterella excrementihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.