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Cluster: Rep_678_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_678_c_0 Rep_678_c_0_270 277501 278709 - 2.A.86.2.1
TF Rep_678_c_0 Rep_678_c_0_271 278781 279173 - DUF24
TC Rep_678_c_0 Rep_678_c_0_272 279267 282065 + 3.A.3.5.15
pfam Rep_678_c_0 Rep_678_c_0_273 282381 283139 + Endonuclease_1
CAZyme Rep_678_c_0 Rep_678_c_0_274 283160 283972 - GT2
pfam Rep_678_c_0 Rep_678_c_0_275 284137 284454 + Bac_DNA_binding
pfam Rep_678_c_0 Rep_678_c_0_276 284520 285803 - Sulfatase
CAZyme Rep_678_c_0 Rep_678_c_0_277 286303 287109 + GT2
pfam Rep_678_c_0 Rep_678_c_0_278 287126 288442 + Wzy_C
CAZyme Rep_678_c_0 Rep_678_c_0_279 288467 289288 + GT25
pfam Rep_678_c_0 Rep_678_c_0_280 289314 291149 + Sulfatase | DUF3413
CAZyme Rep_678_c_0 Rep_678_c_0_281 291202 292317 + GT4
Gene ID: Rep_678_c_0_270
Type: TC
Location: 277501 - 278709 (-)
Gene ID: Rep_678_c_0_271
Type: TF
Location: 278781 - 279173 (-)
Gene ID: Rep_678_c_0_272
Type: TC
Location: 279267 - 282065 (+)
Gene ID: Rep_678_c_0_273
Type: pfam
Location: 282381 - 283139 (+)
Gene ID: Rep_678_c_0_274
Type: CAZyme
Location: 283160 - 283972 (-)
Gene ID: Rep_678_c_0_275
Type: pfam
Location: 284137 - 284454 (+)
Gene ID: Rep_678_c_0_276
Type: pfam
Location: 284520 - 285803 (-)
Gene ID: Rep_678_c_0_277
Type: CAZyme
Location: 286303 - 287109 (+)
Gene ID: Rep_678_c_0_278
Type: pfam
Location: 287126 - 288442 (+)
Gene ID: Rep_678_c_0_279
Type: CAZyme
Location: 288467 - 289288 (+)
Gene ID: Rep_678_c_0_280
Type: pfam
Location: 289314 - 291149 (+)
Gene ID: Rep_678_c_0_281
Type: CAZyme
Location: 291202 - 292317 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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