Cluster: Rep_648_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_648
- CGC Family ID: CGCFAM_05138
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_648_c_62 | Rep_648_c_62_13 | 14253 | 15134 | + | 4.F.1.1.8 |
| NULL(UNKNOWN) | Rep_648_c_62 | Rep_648_c_62_14 | 15587 | 16996 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_648_c_62 | Rep_648_c_62_15 | 17395 | 17535 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_648_c_62 | Rep_648_c_62_16 | 17734 | 19149 | - | GT10 |
Gene ID: Rep_648_c_62_13
Type: TC
Location: 14253 - 15134 (+)
Type: TC
Location: 14253 - 15134 (+)
Gene ID: Rep_648_c_62_14
Type:
Location: 15587 - 16996 (+)
Type:
Location: 15587 - 16996 (+)
Gene ID: Rep_648_c_62_15
Type:
Location: 17395 - 17535 (+)
Type:
Location: 17395 - 17535 (+)
Gene ID: Rep_648_c_62_16
Type: CAZyme
Location: 17734 - 19149 (-)
Type: CAZyme
Location: 17734 - 19149 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
RGIG4140
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.