Cluster: Rep_647_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_647
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_647_c_108 | Rep_647_c_108_59 | 58986 | 59414 | + | GT2 |
| NULL(UNKNOWN) | Rep_647_c_108 | Rep_647_c_108_60 | 59422 | 59922 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_647_c_108 | Rep_647_c_108_61 | 59909 | 60859 | + | GT2 |
| CAZyme | Rep_647_c_108 | Rep_647_c_108_62 | 60877 | 61800 | + | GT2 |
| pfam | Rep_647_c_108 | Rep_647_c_108_63 | 61797 | 62885 | - | Glyco_transf_10 |
| TC | Rep_647_c_108 | Rep_647_c_108_64 | 62931 | 63767 | - | 9.B.1.1.5 |
Gene ID: Rep_647_c_108_59
Type: CAZyme
Location: 58986 - 59414 (+)
Type: CAZyme
Location: 58986 - 59414 (+)
Gene ID: Rep_647_c_108_60
Type:
Location: 59422 - 59922 (+)
Type:
Location: 59422 - 59922 (+)
Gene ID: Rep_647_c_108_61
Type: CAZyme
Location: 59909 - 60859 (+)
Type: CAZyme
Location: 59909 - 60859 (+)
Gene ID: Rep_647_c_108_62
Type: CAZyme
Location: 60877 - 61800 (+)
Type: CAZyme
Location: 60877 - 61800 (+)
Gene ID: Rep_647_c_108_63
Type: pfam
Location: 61797 - 62885 (-)
Type: pfam
Location: 61797 - 62885 (-)
Gene ID: Rep_647_c_108_64
Type: TC
Location: 62931 - 63767 (-)
Type: TC
Location: 62931 - 63767 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
UBA7488
Species
UBA7488 sp002477185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.