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Cluster: Rep_647_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_647_c_74 Rep_647_c_74_1 2 886 + 3.A.1.5.21
TC Rep_647_c_74 Rep_647_c_74_2 883 2415 + 3.A.1.5.24
pfam Rep_647_c_74 Rep_647_c_74_3 2490 3620 - DnaJ | DnaJ_CXXCXGXG | DnaJ_C
TC Rep_647_c_74 Rep_647_c_74_4 3921 5840 - 1.A.33.1.2
TC Rep_647_c_74 Rep_647_c_74_5 6160 8040 + 9.B.34.1.2
pfam Rep_647_c_74 Rep_647_c_74_6 8042 8338 + DivIC
CAZyme Rep_647_c_74 Rep_647_c_74_7 8339 9235 + GT2
CAZyme Rep_647_c_74 Rep_647_c_74_8 9232 10158 + GT2
NULL(UNKNOWN) Rep_647_c_74 Rep_647_c_74_9 10278 10715 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_647_c_74 Rep_647_c_74_10 10728 12035 - 2.A.1.57.4
Gene ID: Rep_647_c_74_1
Type: TC
Location: 2 - 886 (+)
Gene ID: Rep_647_c_74_2
Type: TC
Location: 883 - 2415 (+)
Gene ID: Rep_647_c_74_3
Type: pfam
Location: 2490 - 3620 (-)
Gene ID: Rep_647_c_74_4
Type: TC
Location: 3921 - 5840 (-)
Gene ID: Rep_647_c_74_5
Type: TC
Location: 6160 - 8040 (+)
Gene ID: Rep_647_c_74_6
Type: pfam
Location: 8042 - 8338 (+)
Gene ID: Rep_647_c_74_7
Type: CAZyme
Location: 8339 - 9235 (+)
Gene ID: Rep_647_c_74_8
Type: CAZyme
Location: 9232 - 10158 (+)
Gene ID: Rep_647_c_74_9
Type:
Location: 10278 - 10715 (-)
Gene ID: Rep_647_c_74_10
Type: TC
Location: 10728 - 12035 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
UBA3637
→
Genus
UBA7488
→
Species
UBA7488 sp002477185

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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