Cluster: Rep_647_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_647
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_647_c_208 | Rep_647_c_208_7 | 12003 | 12932 | + | 1.A.34.1.2 |
| pfam | Rep_647_c_208 | Rep_647_c_208_8 | 12979 | 14379 | + | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1 |
| pfam | Rep_647_c_208 | Rep_647_c_208_9 | 14738 | 15316 | - | Ferritin | Rubrerythrin | RUBY_RBDX |
| CAZyme | Rep_647_c_208 | Rep_647_c_208_10 | 15411 | 16406 | - | GT11 |
| pfam | Rep_647_c_208 | Rep_647_c_208_11 | 16613 | 17470 | + | DUF3943 |
| CAZyme | Rep_647_c_208 | Rep_647_c_208_12 | 17558 | 18712 | + | CE9 |
| CAZyme | Rep_647_c_208 | Rep_647_c_208_13 | 18778 | 19293 | - | GT6 |
Gene ID: Rep_647_c_208_7
Type: TC
Location: 12003 - 12932 (+)
Type: TC
Location: 12003 - 12932 (+)
Gene ID: Rep_647_c_208_8
Type: pfam
Location: 12979 - 14379 (+)
Type: pfam
Location: 12979 - 14379 (+)
Gene ID: Rep_647_c_208_9
Type: pfam
Location: 14738 - 15316 (-)
Type: pfam
Location: 14738 - 15316 (-)
Gene ID: Rep_647_c_208_10
Type: CAZyme
Location: 15411 - 16406 (-)
Type: CAZyme
Location: 15411 - 16406 (-)
Gene ID: Rep_647_c_208_11
Type: pfam
Location: 16613 - 17470 (+)
Type: pfam
Location: 16613 - 17470 (+)
Gene ID: Rep_647_c_208_12
Type: CAZyme
Location: 17558 - 18712 (+)
Type: CAZyme
Location: 17558 - 18712 (+)
Gene ID: Rep_647_c_208_13
Type: CAZyme
Location: 18778 - 19293 (-)
Type: CAZyme
Location: 18778 - 19293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
UBA7488
Species
UBA7488 sp002477185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.