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Cluster: Rep_644_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_644_c_0 Rep_644_c_0_669 727942 729027 + 9.B.146.1.6
TC Rep_644_c_0 Rep_644_c_0_670 729033 730253 + 2.A.103.1.3
CAZyme Rep_644_c_0 Rep_644_c_0_671 730255 731337 + GT28
pfam Rep_644_c_0 Rep_644_c_0_672 731576 732064 - N_methyl
TF Rep_644_c_0 Rep_644_c_0_673 732204 732533 + HTH_5
TC Rep_644_c_0 Rep_644_c_0_674 732530 734434 + 3.A.3.6.5
CAZyme Rep_644_c_0 Rep_644_c_0_675 734981 737086 + GT9
pfam Rep_644_c_0 Rep_644_c_0_676 737100 737783 + Hexapep
NULL(UNKNOWN) Rep_644_c_0 Rep_644_c_0_677 737836 738408 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_644_c_0 Rep_644_c_0_678 738513 741341 - 4.A.2.1.17
Gene ID: Rep_644_c_0_669
Type: TC
Location: 727942 - 729027 (+)
Gene ID: Rep_644_c_0_670
Type: TC
Location: 729033 - 730253 (+)
Gene ID: Rep_644_c_0_671
Type: CAZyme
Location: 730255 - 731337 (+)
Gene ID: Rep_644_c_0_672
Type: pfam
Location: 731576 - 732064 (-)
Gene ID: Rep_644_c_0_673
Type: TF
Location: 732204 - 732533 (+)
Gene ID: Rep_644_c_0_674
Type: TC
Location: 732530 - 734434 (+)
Gene ID: Rep_644_c_0_675
Type: CAZyme
Location: 734981 - 737086 (+)
Gene ID: Rep_644_c_0_676
Type: pfam
Location: 737100 - 737783 (+)
Gene ID: Rep_644_c_0_677
Type:
Location: 737836 - 738408 (-)
Gene ID: Rep_644_c_0_678
Type: TC
Location: 738513 - 741341 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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