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Cluster: Rep_644_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_644_c_0 Rep_644_c_0_1281 1398464 1400257 + 3.B.1.1.6
TC Rep_644_c_0 Rep_644_c_0_1282 1400269 1401435 + 3.B.1.1.1
CAZyme Rep_644_c_0 Rep_644_c_0_1283 1401493 1402563 - GT9
STP Rep_644_c_0 Rep_644_c_0_1284 1402560 1403207 - HhH-GPD
TC Rep_644_c_0 Rep_644_c_0_1285 1403197 1404015 - 3.A.1.15.11
TC Rep_644_c_0 Rep_644_c_0_1286 1404012 1404800 - 3.A.1.15.11
TC Rep_644_c_0 Rep_644_c_0_1287 1404788 1405675 - 3.A.1.15.3
Gene ID: Rep_644_c_0_1281
Type: TC
Location: 1398464 - 1400257 (+)
Gene ID: Rep_644_c_0_1282
Type: TC
Location: 1400269 - 1401435 (+)
Gene ID: Rep_644_c_0_1283
Type: CAZyme
Location: 1401493 - 1402563 (-)
Gene ID: Rep_644_c_0_1284
Type: STP
Location: 1402560 - 1403207 (-)
Gene ID: Rep_644_c_0_1285
Type: TC
Location: 1403197 - 1404015 (-)
Gene ID: Rep_644_c_0_1286
Type: TC
Location: 1404012 - 1404800 (-)
Gene ID: Rep_644_c_0_1287
Type: TC
Location: 1404788 - 1405675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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