Cluster: Rep_644_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_644
- CGC Family ID: CGCFAM_03911
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_644_c_0 | Rep_644_c_0_1197 | 1302459 | 1305113 | - | CBM20 | GH77 |
| TC | Rep_644_c_0 | Rep_644_c_0_1198 | 1305117 | 1306439 | - | 2.A.2.6.2 |
| TC | Rep_644_c_0 | Rep_644_c_0_1199 | 1306551 | 1306841 | + | 2.A.7.2.1 |
| pfam | Rep_644_c_0 | Rep_644_c_0_1200 | 1306811 | 1306963 | + | EamA |
| STP | Rep_644_c_0 | Rep_644_c_0_1201 | 1307009 | 1308196 | + | Sigma70_r2 | Sigma70_r3 | Sigma70_r4 |
| TC | Rep_644_c_0 | Rep_644_c_0_1202 | 1308396 | 1310000 | - | 3.B.1.1.5 |
Gene ID: Rep_644_c_0_1197
Type: CAZyme
Location: 1302459 - 1305113 (-)
Type: CAZyme
Location: 1302459 - 1305113 (-)
Gene ID: Rep_644_c_0_1198
Type: TC
Location: 1305117 - 1306439 (-)
Type: TC
Location: 1305117 - 1306439 (-)
Gene ID: Rep_644_c_0_1199
Type: TC
Location: 1306551 - 1306841 (+)
Type: TC
Location: 1306551 - 1306841 (+)
Gene ID: Rep_644_c_0_1200
Type: pfam
Location: 1306811 - 1306963 (+)
Type: pfam
Location: 1306811 - 1306963 (+)
Gene ID: Rep_644_c_0_1201
Type: STP
Location: 1307009 - 1308196 (+)
Type: STP
Location: 1307009 - 1308196 (+)
Gene ID: Rep_644_c_0_1202
Type: TC
Location: 1308396 - 1310000 (-)
Type: TC
Location: 1308396 - 1310000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Elusimicrobiota
Class
Elusimicrobia
Order
Elusimicrobiales
Family
Elusimicrobiaceae
Genus
Avelusimicrobium
Species
Avelusimicrobium sp900541355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.