Cluster: Rep_643_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_643
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_643_c_45 | Rep_643_c_45_12 | 14103 | 14711 | + | 1.B.6.1.3 |
| CAZyme | Rep_643_c_45 | Rep_643_c_45_13 | 14819 | 16261 | - | GH13_5 |
| pfam | Rep_643_c_45 | Rep_643_c_45_14 | 16463 | 18178 | + | TPP_enzyme_M | POR_N | TPP_enzyme_C | TPP_enzyme_N |
| TC | Rep_643_c_45 | Rep_643_c_45_15 | 18255 | 19946 | - | 4.A.1.1.9 |
Gene ID: Rep_643_c_45_12
Type: TC
Location: 14103 - 14711 (+)
Type: TC
Location: 14103 - 14711 (+)
Gene ID: Rep_643_c_45_13
Type: CAZyme
Location: 14819 - 16261 (-)
Type: CAZyme
Location: 14819 - 16261 (-)
Gene ID: Rep_643_c_45_14
Type: pfam
Location: 16463 - 18178 (+)
Type: pfam
Location: 16463 - 18178 (+)
Gene ID: Rep_643_c_45_15
Type: TC
Location: 18255 - 19946 (-)
Type: TC
Location: 18255 - 19946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Elusimicrobiota
Class
Elusimicrobia
Order
Elusimicrobiales
Family
Elusimicrobiaceae
Genus
Avelusimicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.