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Cluster: Rep_641_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_641_c_96 Rep_641_c_96_2 650 1861 + GT2
STP Rep_641_c_96 Rep_641_c_96_3 2019 2654 + TetR_N
pfam Rep_641_c_96 Rep_641_c_96_4 2651 3994 + OEP | OEP
TC Rep_641_c_96 Rep_641_c_96_5 3991 4713 + 3.A.1.105.16
TC Rep_641_c_96 Rep_641_c_96_6 4722 5450 + 3.A.1.105.4
TC Rep_641_c_96 Rep_641_c_96_7 5443 6369 + 3.A.1.105.15
TC Rep_641_c_96 Rep_641_c_96_8 6366 7514 + 3.A.1.105.4
TC Rep_641_c_96 Rep_641_c_96_9 7511 8629 + 3.A.1.105.4
Gene ID: Rep_641_c_96_2
Type: CAZyme
Location: 650 - 1861 (+)
Gene ID: Rep_641_c_96_3
Type: STP
Location: 2019 - 2654 (+)
Gene ID: Rep_641_c_96_4
Type: pfam
Location: 2651 - 3994 (+)
Gene ID: Rep_641_c_96_5
Type: TC
Location: 3991 - 4713 (+)
Gene ID: Rep_641_c_96_6
Type: TC
Location: 4722 - 5450 (+)
Gene ID: Rep_641_c_96_7
Type: TC
Location: 5443 - 6369 (+)
Gene ID: Rep_641_c_96_8
Type: TC
Location: 6366 - 7514 (+)
Gene ID: Rep_641_c_96_9
Type: TC
Location: 7511 - 8629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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