Cluster: Rep_63_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: Rep_63
- CGC Family ID: CGCFAM_00001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_63_c_44 | Rep_63_c_44_1 | 3 | 1286 | + | GH2 |
| CAZyme | Rep_63_c_44 | Rep_63_c_44_2 | 2022 | 3188 | - | CE1 |
| CAZyme | Rep_63_c_44 | Rep_63_c_44_3 | 3199 | 5643 | - | GH2 |
| pfam | Rep_63_c_44 | Rep_63_c_44_4 | 5722 | 6846 | - | SusE |
| pfam | Rep_63_c_44 | Rep_63_c_44_5 | 6858 | 8588 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_63_c_44 | Rep_63_c_44_6 | 8605 | 11652 | - | 1.B.14.6.1 |
Gene ID: Rep_63_c_44_1
Type: CAZyme
Location: 3 - 1286 (+)
Type: CAZyme
Location: 3 - 1286 (+)
Gene ID: Rep_63_c_44_2
Type: CAZyme
Location: 2022 - 3188 (-)
Type: CAZyme
Location: 2022 - 3188 (-)
Gene ID: Rep_63_c_44_3
Type: CAZyme
Location: 3199 - 5643 (-)
Type: CAZyme
Location: 3199 - 5643 (-)
Gene ID: Rep_63_c_44_4
Type: pfam
Location: 5722 - 6846 (-)
Type: pfam
Location: 5722 - 6846 (-)
Gene ID: Rep_63_c_44_5
Type: pfam
Location: 6858 - 8588 (-)
Type: pfam
Location: 6858 - 8588 (-)
Gene ID: Rep_63_c_44_6
Type: TC
Location: 8605 - 11652 (-)
Type: TC
Location: 8605 - 11652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp902491795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.