Cluster: Rep_63_CGC18
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_63
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_63_c_22 | Rep_63_c_22_10 | 6361 | 8208 | - | 2.A.9.3.2 |
| pfam | Rep_63_c_22 | Rep_63_c_22_11 | 8208 | 10016 | - | DUF349 | DUF349 | DUF349 | DUF349 | DUF349 |
| pfam | Rep_63_c_22 | Rep_63_c_22_12 | 10119 | 10802 | + | tRNA_m1G_MT |
| CAZyme | Rep_63_c_22 | Rep_63_c_22_13 | 11130 | 13271 | + | CE8 | PL10_1 |
| CAZyme | Rep_63_c_22 | Rep_63_c_22_14 | 13300 | 15270 | + | GH127 |
| STP | Rep_63_c_22 | Rep_63_c_22_15 | 15333 | 16106 | - | Fer4 |
| pfam | Rep_63_c_22 | Rep_63_c_22_16 | 16262 | 17101 | + | Lactamase_B |
| CAZyme | Rep_63_c_22 | Rep_63_c_22_17 | 17108 | 20404 | + | GH106 |
| TF | Rep_63_c_22 | Rep_63_c_22_18 | 20470 | 24318 | - | HTH_AraC |
| TC | Rep_63_c_22 | Rep_63_c_22_19 | 24464 | 27472 | + | 1.B.14.6.1 |
| pfam | Rep_63_c_22 | Rep_63_c_22_20 | 27485 | 29350 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_63_c_22 | Rep_63_c_22_21 | 29608 | 31323 | + | Esterase_PHB |
| CAZyme | Rep_63_c_22 | Rep_63_c_22_22 | 31336 | 33582 | + | GH3 |
Gene ID: Rep_63_c_22_10
Type: TC
Location: 6361 - 8208 (-)
Type: TC
Location: 6361 - 8208 (-)
Gene ID: Rep_63_c_22_11
Type: pfam
Location: 8208 - 10016 (-)
Type: pfam
Location: 8208 - 10016 (-)
Gene ID: Rep_63_c_22_12
Type: pfam
Location: 10119 - 10802 (+)
Type: pfam
Location: 10119 - 10802 (+)
Gene ID: Rep_63_c_22_13
Type: CAZyme
Location: 11130 - 13271 (+)
Type: CAZyme
Location: 11130 - 13271 (+)
Gene ID: Rep_63_c_22_14
Type: CAZyme
Location: 13300 - 15270 (+)
Type: CAZyme
Location: 13300 - 15270 (+)
Gene ID: Rep_63_c_22_15
Type: STP
Location: 15333 - 16106 (-)
Type: STP
Location: 15333 - 16106 (-)
Gene ID: Rep_63_c_22_16
Type: pfam
Location: 16262 - 17101 (+)
Type: pfam
Location: 16262 - 17101 (+)
Gene ID: Rep_63_c_22_17
Type: CAZyme
Location: 17108 - 20404 (+)
Type: CAZyme
Location: 17108 - 20404 (+)
Gene ID: Rep_63_c_22_18
Type: TF
Location: 20470 - 24318 (-)
Type: TF
Location: 20470 - 24318 (-)
Gene ID: Rep_63_c_22_19
Type: TC
Location: 24464 - 27472 (+)
Type: TC
Location: 24464 - 27472 (+)
Gene ID: Rep_63_c_22_20
Type: pfam
Location: 27485 - 29350 (+)
Type: pfam
Location: 27485 - 29350 (+)
Gene ID: Rep_63_c_22_21
Type: pfam
Location: 29608 - 31323 (+)
Type: pfam
Location: 29608 - 31323 (+)
Gene ID: Rep_63_c_22_22
Type: CAZyme
Location: 31336 - 33582 (+)
Type: CAZyme
Location: 31336 - 33582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp902491795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.