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Cluster: Rep_634_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_634_c_1 Rep_634_c_1_86 94839 96320 + 2.A.1.14.2
pfam Rep_634_c_1 Rep_634_c_1_87 96332 97786 + Mannitol_dh | Mannitol_dh_C
pfam Rep_634_c_1 Rep_634_c_1_88 97895 99346 + GD_AH_second | SAF | GD_AH_C
CAZyme Rep_634_c_1 Rep_634_c_1_89 99349 100395 + CE8
CAZyme Rep_634_c_1 Rep_634_c_1_90 100397 102031 + CBM91 | GH43_10
pfam Rep_634_c_1 Rep_634_c_1_91 102108 102746 - DUF1062
TC Rep_634_c_1 Rep_634_c_1_92 103050 104375 - 2.A.66.1.4
Gene ID: Rep_634_c_1_86
Type: TC
Location: 94839 - 96320 (+)
Gene ID: Rep_634_c_1_87
Type: pfam
Location: 96332 - 97786 (+)
Gene ID: Rep_634_c_1_88
Type: pfam
Location: 97895 - 99346 (+)
Gene ID: Rep_634_c_1_89
Type: CAZyme
Location: 99349 - 100395 (+)
Gene ID: Rep_634_c_1_90
Type: CAZyme
Location: 100397 - 102031 (+)
Gene ID: Rep_634_c_1_91
Type: pfam
Location: 102108 - 102746 (-)
Gene ID: Rep_634_c_1_92
Type: TC
Location: 103050 - 104375 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_634_c_1_88 vegan > omnivore 1.02675 0.01415

🧭 Explore Read Mapping of CGC

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