Cluster: Rep_634_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_634
- CGC Family ID: CGCFAM_00715
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_634_c_1 | Rep_634_c_1_32 | 30942 | 32852 | + | 1.A.33.1.2 |
| NULL(UNKNOWN) | Rep_634_c_1 | Rep_634_c_1_33 | 33131 | 33730 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_634_c_1 | Rep_634_c_1_34 | 33836 | 34156 | + | 2.A.7.1.4 |
| CAZyme | Rep_634_c_1 | Rep_634_c_1_35 | 34086 | 35462 | - | GH29 |
| pfam | Rep_634_c_1 | Rep_634_c_1_36 | 35498 | 36397 | - | EamA | EamA |
| TC | Rep_634_c_1 | Rep_634_c_1_37 | 36543 | 39563 | + | 2.A.6.4.3 |
Gene ID: Rep_634_c_1_32
Type: TC
Location: 30942 - 32852 (+)
Type: TC
Location: 30942 - 32852 (+)
Gene ID: Rep_634_c_1_33
Type:
Location: 33131 - 33730 (+)
Type:
Location: 33131 - 33730 (+)
Gene ID: Rep_634_c_1_34
Type: TC
Location: 33836 - 34156 (+)
Type: TC
Location: 33836 - 34156 (+)
Gene ID: Rep_634_c_1_35
Type: CAZyme
Location: 34086 - 35462 (-)
Type: CAZyme
Location: 34086 - 35462 (-)
Gene ID: Rep_634_c_1_36
Type: pfam
Location: 35498 - 36397 (-)
Type: pfam
Location: 35498 - 36397 (-)
Gene ID: Rep_634_c_1_37
Type: TC
Location: 36543 - 39563 (+)
Type: TC
Location: 36543 - 39563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900760675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.