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Cluster: Rep_634_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_634_c_50 Rep_634_c_50_6 3845 5875 - GH13_8
NULL(UNKNOWN) Rep_634_c_50 Rep_634_c_50_7 6206 6352 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_634_c_50 Rep_634_c_50_8 6365 8005 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_634_c_50 Rep_634_c_50_9 8192 9715 + 2.A.17.1.7
STP Rep_634_c_50 Rep_634_c_50_10 10020 10646 + TetR_N
TC Rep_634_c_50 Rep_634_c_50_11 10694 12013 + 1.B.17.2.10
pfam Rep_634_c_50 Rep_634_c_50_12 12053 13063 + CusB_dom_1 | HlyD_3 | HlyD_D23
TC Rep_634_c_50 Rep_634_c_50_13 13078 16170 + 2.A.6.3.6
Gene ID: Rep_634_c_50_6
Type: CAZyme
Location: 3845 - 5875 (-)
Gene ID: Rep_634_c_50_7
Type:
Location: 6206 - 6352 (+)
Gene ID: Rep_634_c_50_8
Type:
Location: 6365 - 8005 (+)
Gene ID: Rep_634_c_50_9
Type: TC
Location: 8192 - 9715 (+)
Gene ID: Rep_634_c_50_10
Type: STP
Location: 10020 - 10646 (+)
Gene ID: Rep_634_c_50_11
Type: TC
Location: 10694 - 12013 (+)
Gene ID: Rep_634_c_50_12
Type: pfam
Location: 12053 - 13063 (+)
Gene ID: Rep_634_c_50_13
Type: TC
Location: 13078 - 16170 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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