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Cluster: Rep_634_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_634_c_28 Rep_634_c_28_9 8089 10284 - GH97
CAZyme Rep_634_c_28 Rep_634_c_28_10 10297 12183 - GH13_46
CAZyme Rep_634_c_28 Rep_634_c_28_11 12230 13558 - GH13
CAZyme Rep_634_c_28 Rep_634_c_28_12 13567 15879 - GH13_36
pfam Rep_634_c_28 Rep_634_c_28_13 15980 17785 - SusE
TC Rep_634_c_28 Rep_634_c_28_14 17804 19453 - 8.A.46.1.1
TC Rep_634_c_28 Rep_634_c_28_15 19467 22490 - 1.B.14.6.1
TC Rep_634_c_28 Rep_634_c_28_16 22551 23861 - 2.A.2.6.2
TC Rep_634_c_28 Rep_634_c_28_17 24059 25444 + 8.A.59.2.1
Gene ID: Rep_634_c_28_9
Type: CAZyme
Location: 8089 - 10284 (-)
Gene ID: Rep_634_c_28_10
Type: CAZyme
Location: 10297 - 12183 (-)
Gene ID: Rep_634_c_28_11
Type: CAZyme
Location: 12230 - 13558 (-)
Gene ID: Rep_634_c_28_12
Type: CAZyme
Location: 13567 - 15879 (-)
Gene ID: Rep_634_c_28_13
Type: pfam
Location: 15980 - 17785 (-)
Gene ID: Rep_634_c_28_14
Type: TC
Location: 17804 - 19453 (-)
Gene ID: Rep_634_c_28_15
Type: TC
Location: 19467 - 22490 (-)
Gene ID: Rep_634_c_28_16
Type: TC
Location: 22551 - 23861 (-)
Gene ID: Rep_634_c_28_17
Type: TC
Location: 24059 - 25444 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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