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Cluster: Rep_634_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_634_c_25 Rep_634_c_25_23 18882 22052 + 1.B.14.6.1
TC Rep_634_c_25 Rep_634_c_25_24 22065 23579 + 8.A.46.1.5
pfam Rep_634_c_25 Rep_634_c_25_25 23599 25323 + TIG
pfam Rep_634_c_25 Rep_634_c_25_26 25346 27310 + TIG
CAZyme Rep_634_c_25 Rep_634_c_25_27 27410 28780 + PL6
CAZyme Rep_634_c_25 Rep_634_c_25_28 28794 31049 + PL6 | PL6_1
CAZyme Rep_634_c_25 Rep_634_c_25_29 31056 33263 + PL17_2 | PL17_2
STP Rep_634_c_25 Rep_634_c_25_30 33286 33630 + AraC_binding
TC Rep_634_c_25 Rep_634_c_25_31 33652 35103 + 2.A.1.14.25
pfam Rep_634_c_25 Rep_634_c_25_32 35130 35882 + adh_short | KR | adh_short_C2 | SDR
CAZyme Rep_634_c_25 Rep_634_c_25_33 35987 37141 + PL38
Gene ID: Rep_634_c_25_23
Type: TC
Location: 18882 - 22052 (+)
Gene ID: Rep_634_c_25_24
Type: TC
Location: 22065 - 23579 (+)
Gene ID: Rep_634_c_25_25
Type: pfam
Location: 23599 - 25323 (+)
Gene ID: Rep_634_c_25_26
Type: pfam
Location: 25346 - 27310 (+)
Gene ID: Rep_634_c_25_27
Type: CAZyme
Location: 27410 - 28780 (+)
Gene ID: Rep_634_c_25_28
Type: CAZyme
Location: 28794 - 31049 (+)
Gene ID: Rep_634_c_25_29
Type: CAZyme
Location: 31056 - 33263 (+)
Gene ID: Rep_634_c_25_30
Type: STP
Location: 33286 - 33630 (+)
Gene ID: Rep_634_c_25_31
Type: TC
Location: 33652 - 35103 (+)
Gene ID: Rep_634_c_25_32
Type: pfam
Location: 35130 - 35882 (+)
Gene ID: Rep_634_c_25_33
Type: CAZyme
Location: 35987 - 37141 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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