Cluster: Rep_634_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_634
- CGC Family ID: CGCFAM_00632
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_634_c_22 | Rep_634_c_22_18 | 24417 | 25814 | - | 1.I.1.1.3 |
| pfam | Rep_634_c_22 | Rep_634_c_22_19 | 26038 | 27510 | + | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C |
| TC | Rep_634_c_22 | Rep_634_c_22_20 | 27816 | 29219 | + | 2.A.66.1.32 |
| TC | Rep_634_c_22 | Rep_634_c_22_21 | 29230 | 29868 | + | 2.A.115.2.14 |
| pfam | Rep_634_c_22 | Rep_634_c_22_22 | 29881 | 30993 | + | RF-1 | PCRF |
| CAZyme | Rep_634_c_22 | Rep_634_c_22_23 | 30986 | 32179 | + | GH171 |
Gene ID: Rep_634_c_22_18
Type: TC
Location: 24417 - 25814 (-)
Type: TC
Location: 24417 - 25814 (-)
Gene ID: Rep_634_c_22_19
Type: pfam
Location: 26038 - 27510 (+)
Type: pfam
Location: 26038 - 27510 (+)
Gene ID: Rep_634_c_22_20
Type: TC
Location: 27816 - 29219 (+)
Type: TC
Location: 27816 - 29219 (+)
Gene ID: Rep_634_c_22_21
Type: TC
Location: 29230 - 29868 (+)
Type: TC
Location: 29230 - 29868 (+)
Gene ID: Rep_634_c_22_22
Type: pfam
Location: 29881 - 30993 (+)
Type: pfam
Location: 29881 - 30993 (+)
Gene ID: Rep_634_c_22_23
Type: CAZyme
Location: 30986 - 32179 (+)
Type: CAZyme
Location: 30986 - 32179 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900760675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.