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Cluster: Rep_634_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_634_c_20 Rep_634_c_20_25 31949 35329 + 1.B.14.6.13
TC Rep_634_c_20 Rep_634_c_20_26 35344 36948 + 8.A.46.2.2
pfam Rep_634_c_20 Rep_634_c_20_27 36975 38090 + GH18_BT1044-like
pfam Rep_634_c_20 Rep_634_c_20_28 38099 39271 + BT_3987-like_N | Laminin_G_3
CAZyme Rep_634_c_20 Rep_634_c_20_29 39303 40730 + GH18
pfam Rep_634_c_20 Rep_634_c_20_30 40755 42242 + BACON | BACON | BACON_2
TC Rep_634_c_20 Rep_634_c_20_31 42417 43730 + 2.A.1.25.3
CAZyme Rep_634_c_20 Rep_634_c_20_32 43748 44758 + GH130_2
CAZyme Rep_634_c_20 Rep_634_c_20_33 44761 47031 + GH92
CAZyme Rep_634_c_20 Rep_634_c_20_34 47044 49272 + GH92
CAZyme Rep_634_c_20 Rep_634_c_20_35 49492 51810 + GH92
Gene ID: Rep_634_c_20_25
Type: TC
Location: 31949 - 35329 (+)
Gene ID: Rep_634_c_20_26
Type: TC
Location: 35344 - 36948 (+)
Gene ID: Rep_634_c_20_27
Type: pfam
Location: 36975 - 38090 (+)
Gene ID: Rep_634_c_20_28
Type: pfam
Location: 38099 - 39271 (+)
Gene ID: Rep_634_c_20_29
Type: CAZyme
Location: 39303 - 40730 (+)
Gene ID: Rep_634_c_20_30
Type: pfam
Location: 40755 - 42242 (+)
Gene ID: Rep_634_c_20_31
Type: TC
Location: 42417 - 43730 (+)
Gene ID: Rep_634_c_20_32
Type: CAZyme
Location: 43748 - 44758 (+)
Gene ID: Rep_634_c_20_33
Type: CAZyme
Location: 44761 - 47031 (+)
Gene ID: Rep_634_c_20_34
Type: CAZyme
Location: 47044 - 49272 (+)
Gene ID: Rep_634_c_20_35
Type: CAZyme
Location: 49492 - 51810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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