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Cluster: Rep_634_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_634_c_16 Rep_634_c_16_3 738 1208 - 1.A.22.1.1
TC Rep_634_c_16 Rep_634_c_16_4 1325 3178 - 3.B.1.1.6
pfam Rep_634_c_16 Rep_634_c_16_5 3335 4429 - AI-2E_transport
TC Rep_634_c_16 Rep_634_c_16_6 4845 8105 + 1.B.14.6.3
pfam Rep_634_c_16 Rep_634_c_16_7 8222 8809 - Hydrolase | HAD_2
CAZyme Rep_634_c_16 Rep_634_c_16_8 8870 11119 - CBM35
TC Rep_634_c_16 Rep_634_c_16_9 11190 13406 - 3.A.10.1.10
pfam Rep_634_c_16 Rep_634_c_16_10 13459 14100 - DUF4738
pfam Rep_634_c_16 Rep_634_c_16_11 14305 14832 - Acetyltransf_1 | Acetyltransf_7
TC Rep_634_c_16 Rep_634_c_16_12 14943 15683 - 1.A.8.2.6
pfam Rep_634_c_16 Rep_634_c_16_13 15696 17189 - FGGY_N | FGGY_C
TC Rep_634_c_16 Rep_634_c_16_14 17486 18748 - 3.D.5.1.1
TC Rep_634_c_16 Rep_634_c_16_15 18771 19379 - 3.D.5.1.1
TC Rep_634_c_16 Rep_634_c_16_16 19390 20046 - 3.D.5.1.1
pfam Rep_634_c_16 Rep_634_c_16_17 20039 20902 - FMN_bind | RUBY_RBDX
TC Rep_634_c_16 Rep_634_c_16_18 20911 22059 - 3.D.5.1.1
Gene ID: Rep_634_c_16_3
Type: TC
Location: 738 - 1208 (-)
Gene ID: Rep_634_c_16_4
Type: TC
Location: 1325 - 3178 (-)
Gene ID: Rep_634_c_16_5
Type: pfam
Location: 3335 - 4429 (-)
Gene ID: Rep_634_c_16_6
Type: TC
Location: 4845 - 8105 (+)
Gene ID: Rep_634_c_16_7
Type: pfam
Location: 8222 - 8809 (-)
Gene ID: Rep_634_c_16_8
Type: CAZyme
Location: 8870 - 11119 (-)
Gene ID: Rep_634_c_16_9
Type: TC
Location: 11190 - 13406 (-)
Gene ID: Rep_634_c_16_10
Type: pfam
Location: 13459 - 14100 (-)
Gene ID: Rep_634_c_16_11
Type: pfam
Location: 14305 - 14832 (-)
Gene ID: Rep_634_c_16_12
Type: TC
Location: 14943 - 15683 (-)
Gene ID: Rep_634_c_16_13
Type: pfam
Location: 15696 - 17189 (-)
Gene ID: Rep_634_c_16_14
Type: TC
Location: 17486 - 18748 (-)
Gene ID: Rep_634_c_16_15
Type: TC
Location: 18771 - 19379 (-)
Gene ID: Rep_634_c_16_16
Type: TC
Location: 19390 - 20046 (-)
Gene ID: Rep_634_c_16_17
Type: pfam
Location: 20039 - 20902 (-)
Gene ID: Rep_634_c_16_18
Type: TC
Location: 20911 - 22059 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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